Publications

Sukanta Mondal

Associate Professor

Bioinformatics and Computational Biology

Department of Biological Sciences, BITS Pilani, K K Birla Goa Campus, Zuarinagar, South Goa, Goa 403726

suku@goa.bits-pilani.ac.in

0832-2580149

List of research articles

Google Scholar Citation

[* Corresponding Author]

Singh P, Tsuda S, Singh SM, Mondal S, Roy U. (2021) Partial characterization of an antifreeze protein (CRY-c) from Cryobacterium psychrotolerans MLB-29 of Arctic glacier cryoconite. Polar Science. Available online 13 March 2021, 100661 (In Press).

Redkar S, Mondal S*, Joseph A, Hareesha KS*. (2020) A Machine Learning Approach for Drug-target Interaction Prediction using Wrapper Feature Selection and Class Balancing. Mol Inform. 39(5):e1900062.

Kumar M, Martin A, Nirgude S, Chaudhary B, Mondal S, Sarkar A. (2020) Quinacrine inhibits GSTA1 activity and induces apoptosis through G 1/S arrest and generation of ROS in human non-small cell lung cancer cell lines. Oncotarget. 11(18):1603-1617.

Pai PP, Mondal S*. (2017) Applying Knowledge of Enzyme Biochemistry to the Prediction of Functional Sites for Aiding Drug Discovery. Curr Top Med Chem. 17(21):2401-2421.

Pai PP, Dattatreya RK, Mondal S*. (2017) Ensemble Architecture for Prediction of Enzyme-ligand Binding Residues Using Evolutionary Information. Mol Inform. 36(11).

Pai PP, Dash T*, Mondal S*. (2017) Sequence-based discrimination of protein-RNA interacting residues using a probabilistic approach. J Theor Biol. 418:77-83.

Pathan J, Mondal S, Sarkar A, Chakrabarty D. (2017) Daboialectin, a C-type lectin from Russell's viper venom induces cytoskeletal damage and apoptosis in human lung cancer cells in vitro. Toxicon 127:11-21.

Pai PP, Mondal S*. (2016) Intriguing cystine-knot miniproteins in drug design and therapeutics. Toxinology. Toxins and Drug Discovery, Editor-in-Chief: Gopalakrishnakone P, Publisher: Springer,

doi:10.1007/978-94-007-6726-3_25-1 (book chapter).

Pai PP, Mondal S*. (2016) MOWGLI: prediction of protein-MannOse interacting residues With ensemble classifiers usinG evoLutionary Information. J Biomol Struct Dyn. 34:2069-2083.

Pai PP, Ranjani SSS, Mondal S*. (2015) PINGU: PredIction of eNzyme catalytic residues usinG seqUence information. PLoS ONE 10:e0135122.

[Extension of this work was presented as a poster at the 2015 NGBT international conference and awarded by the FEBS journal]

Pai PP, Mondal S*. (2015) Computational approaches for animal toxins to aid drug discovery. Toxinology. Toxins and Drug Discovery, Editor-in-Chief: Gopalakrishnakone P, Publisher: Springer, doi:10.1007/978-94-007-6726-3_20-1 (book chapter).

Mir MA, Arumugam M, Mondal S, Rajeswari HS, Ramakumar S, Ajitkumar P. (2015) Mycobacterium tuberculosis Cell Division Protein, FtsE, is an ATPase in Dimeric Form. Protein J. 34:35-47.

Dhole K, Singh G, Pai PP, Mondal S*. (2014) Sequence-based prediction of protein-protein interaction sites with L1-logreg classifier. J Theor Biol. 348:47-54.

[Featured on Global Medical Discovery as a Key Scientific Article contributing to excellence in biomedical research]

Mondal S*, Pai PP. (2014) Chou's pseudo amino acid composition improves sequence-based antifreeze protein prediction. J Theor Biol. 356:30-35.

Singh G, Dhole K, Pai PP, Mondal S*. (2014) SPRINGS: Prediction of Protein-Protein Interaction Sites Using Artificial Neural Networks. PeerJ PrePrints 2:e266v2, doi:10.7287/peerj.preprints.266v2.

Before joining BITS-Pilani

Mondal S, Nagao C, Mizuguchi K. (2010) Detecting subtle functional differences in ketopantoate reductase and related enzymes using a rule-based approach with sequence-structure homology recognition scores. Protein Engineering Design and Selection (PEDS) 23:859-869.

Mondal S, Mizuguchi K. (2009) Structural insights into the enzyme mechanism of a new family of D-2-hydroxyacid dehydrogenases, a close homolog of 2-ketopantoate reductase. Genome Informatics 23:98-105.

Mondal S, Babu RM, Bhavna R, Ramakumar S. (2007) In silico detection of binding mode of J-superfamily conotoxin pl14a with Kv1.6 channel. In Silico Biol. 7:0018.

Mondal S, Bhavna R, Babu RM, Ramakumar S. (2006) Pseudo amino acid composition and multi-class support vector machines approach for conotoxin superfamily classification. J Theor Biol. 243:252-260.

Mondal S, Babu RM, Bhavna R, Ramakumar S. (2006) I-conotoxin superfamily revisited. J Pept Sci. 12:679-685.

Mondal S, Vijayan R, Shichina K, Babu RM, Ramakumar S. (2005) I-superfamily conotoxins: sequence and structure analysis. In Silico Biol. 5:557-571.

Mondal S, Narasegowda RS, Nagaraj B, Yathirajan HS, Narasimhamurthy T, Rathore RS. (2005) 2,2’-Dipropylmalonic acid: intermolecular association via strong O-H…O hydrogen bonds. Acta CrystE. E61, o151-o153.

Narasegowda RS, Sony SMM, Mondal S, Nagaraj B, Yathirajan HS, Narasimhamurthy T, Charles P, Ponnuswamy MN, Nethaji M, Rathore RS. (2005) 2,2’-Diaminodibenzyl: a rare case of crystallographically non-compliant molecular symmetry. Acta CrystE. E61, o843-o845.

Fernando SA, Selvarani P, Das S, Kumar ChK, Mondal S, Ramakumar S, Sekar K. (2004) THGS: a web-based database of Transmembrane Helices in Genome Sequences. Nucleic Acids Res. 32 Database issue:D125-128.

Mondal S, Jaishankar SP, Ramakumar S. (2003) Role of context in the relationship between form and function: structural plasticity of some PROSITE patterns. Biochem Biophys Res Commun. 305:1078-1084.

Integrated first degree

Higher Degree

Doctor Programmes

Student Activities

Student Services

For Prospective Students

Students Club

Integrated First Degree

Higher Degree

Doctoral Programmes

WILP

Dubai Campus

Give us your feedback

Upload Screenshot

Sukanta Mondal

Publications

List of research articles

Keep Exploring

Cookie Consent