Associate Professor
Jain DS, Gupte SR, Aduri R. “A Data Driven Model for Predicting RNA-Protein Interactions based on Gradient Boosting Machine” Sci. Rep. 8: 9552 (2018; DOI: 10.1038/s41598-018-27814-2)
A Reusable Machine-Constructed Feature Representation for Protein Sequences
Multi Purpose Protein Prediction Vector (MP3vec) representation is constructed from a protein’s sequence and its PSSM profile using all the available high resolution protein structural data with the aim to aid in 'transfer learning' to overcome the 'small data' problem in developing predictive models for biomacromolecular interactions. Please refer to the Readme file and the binary can be downloaded as a zip file.
"Efficient Integration of Molecular Representation and Message-Passing Neural Networks for Predicting Small Molecule Drug-like Properties" by Shreyas Bhat Brahmavar, Mrunmay Mohan Shelar, Revanth Harinarthini, Bandaru Hemantha Sai krishna, Nahush Harihar Kumta, Ojas Wadhwani, Raviprasad Aduri (Manuscript submimtted)
PseMA
Pseudouridine site predictor
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